STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM57075.1Transglycosylase; Pfam: Penicillin binding protein transpeptidase domain; Pfam: Transglycosylase. (708 aa)    
Predicted Functional Partners:
ALM56711.1
Pfam: Penicillin-binding Protein dimerisation domain; Pfam: PASTA domain; Pfam: Penicillin binding protein transpeptidase domain.
 
 0.985
ALM57168.1
Pfam: Penicillin-binding Protein dimerisation domain; Pfam: Penicillin binding protein transpeptidase domain.
 
 
 0.980
ALM56254.1
PRINTS: D-Ala-D-Ala carboxypeptidase 1 (S11) family signature; Pfam: Domain of unknown function (DUF1958); Pfam: D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.941
ALM57071.1
Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
 
 
 0.931
ALM57336.1
Pfam: Transglycosylase.
  
  
 
0.927
mgt
Glycosyltransferase; Peptidoglycan polymerase that catalyzes glycan chain elongation using lipid-linked disaccharide-pentapeptide as the substrate; Belongs to the glycosyltransferase 51 family.
  
  
0.925
ALM57477.1
Pfam: D-alanyl-D-alanine carboxypeptidase.
     
 0.906
ALM57558.1
Pfam: Cell cycle protein; TIGRFAM: rodA_shape: rod shape-determining protein RodA; Belongs to the SEDS family.
 
 
 
 0.830
recU
Recombinase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
  
 0.800
ALM56653.1
Pfam: Cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.782
Your Current Organism:
Staphylococcus equorum
NCBI taxonomy Id: 246432
Other names: ATCC 43958, CCUG 30109, CIP 103502, DSM 20674, NCTC 12414, NRRL B-14765, S. equorum, Staphylococcus sp. SR1, strain PA231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.