Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALM57500.1 | ALM57501.1 | SE1039_17170 | SE1039_17180 | Membrane protein; Pfam: ABC-2 family transporter protein. | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | 0.999 |
ALM57500.1 | ALM57502.1 | SE1039_17170 | SE1039_17190 | Membrane protein; Pfam: ABC-2 family transporter protein. | Pfam: ABC-2 family transporter protein. | 0.808 |
ALM57500.1 | ALM57503.1 | SE1039_17170 | SE1039_17200 | Membrane protein; Pfam: ABC-2 family transporter protein. | Sodium ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities. | 0.770 |
ALM57500.1 | ALM57504.1 | SE1039_17170 | SE1039_17210 | Membrane protein; Pfam: ABC-2 family transporter protein. | Pfam: Bacterial regulatory proteins, gntR family; SMART: helix_turn_helix gluconate operon transcriptional repressor. | 0.797 |
ALM57500.1 | ALM57505.1 | SE1039_17170 | SE1039_17220 | Membrane protein; Pfam: ABC-2 family transporter protein. | Membrane protein. | 0.412 |
ALM57500.1 | ALM57876.1 | SE1039_17170 | SE1039_20930 | Membrane protein; Pfam: ABC-2 family transporter protein. | Membrane protein; Pfam: ABC-2 family transporter protein. | 0.597 |
ALM57501.1 | ALM57500.1 | SE1039_17180 | SE1039_17170 | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | Membrane protein; Pfam: ABC-2 family transporter protein. | 0.999 |
ALM57501.1 | ALM57502.1 | SE1039_17180 | SE1039_17190 | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | Pfam: ABC-2 family transporter protein. | 0.808 |
ALM57501.1 | ALM57503.1 | SE1039_17180 | SE1039_17200 | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | Sodium ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities. | 0.770 |
ALM57501.1 | ALM57504.1 | SE1039_17180 | SE1039_17210 | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | Pfam: Bacterial regulatory proteins, gntR family; SMART: helix_turn_helix gluconate operon transcriptional repressor. | 0.798 |
ALM57501.1 | ALM57505.1 | SE1039_17180 | SE1039_17220 | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | Membrane protein. | 0.412 |
ALM57501.1 | ALM57876.1 | SE1039_17180 | SE1039_20930 | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | Membrane protein; Pfam: ABC-2 family transporter protein. | 0.689 |
ALM57502.1 | ALM57500.1 | SE1039_17190 | SE1039_17170 | Pfam: ABC-2 family transporter protein. | Membrane protein; Pfam: ABC-2 family transporter protein. | 0.808 |
ALM57502.1 | ALM57501.1 | SE1039_17190 | SE1039_17180 | Pfam: ABC-2 family transporter protein. | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | 0.808 |
ALM57502.1 | ALM57503.1 | SE1039_17190 | SE1039_17200 | Pfam: ABC-2 family transporter protein. | Sodium ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities. | 0.892 |
ALM57502.1 | ALM57504.1 | SE1039_17190 | SE1039_17210 | Pfam: ABC-2 family transporter protein. | Pfam: Bacterial regulatory proteins, gntR family; SMART: helix_turn_helix gluconate operon transcriptional repressor. | 0.892 |
ALM57502.1 | ALM57505.1 | SE1039_17190 | SE1039_17220 | Pfam: ABC-2 family transporter protein. | Membrane protein. | 0.503 |
ALM57503.1 | ALM57500.1 | SE1039_17200 | SE1039_17170 | Sodium ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities. | Membrane protein; Pfam: ABC-2 family transporter protein. | 0.770 |
ALM57503.1 | ALM57501.1 | SE1039_17200 | SE1039_17180 | Sodium ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities. | Antibiotic ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. | 0.770 |
ALM57503.1 | ALM57502.1 | SE1039_17200 | SE1039_17190 | Sodium ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities. | Pfam: ABC-2 family transporter protein. | 0.892 |
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