STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM57948.1Membrane protein; Pfam: Fusaric acid resistance protein-like. (638 aa)    
Predicted Functional Partners:
ALM57809.1
Membrane protein.
  
     0.758
ALM57487.1
Pfam: Pectate lyase superfamily protein.
  
     0.741
ALM57281.1
Hypothetical protein.
  
     0.716
ALM57701.1
Pfam: Acetyltransferase (GNAT) domain.
  
     0.679
ALM55964.1
Hypothetical protein.
  
     0.678
ALM56461.1
Nitrogen-fixing protein NifU; Pfam: NifU-like N terminal domain; TIGRFAM: SUF_scaf_2: SUF system FeS assembly protein, NifU family.
   
    0.671
ALM56292.1
Hypothetical protein.
  
     0.668
ALM57789.1
Lysostaphin resistance protein A; Pfam: CAAX protease self-immunity.
  
     0.660
ALM57605.1
Hypothetical protein; Pfam: ATP-grasp domain.
  
     0.641
ALM56844.1
Pfam: Bacterial membrane protein YfhO.
  
     0.631
Your Current Organism:
Staphylococcus equorum
NCBI taxonomy Id: 246432
Other names: ATCC 43958, CCUG 30109, CIP 103502, DSM 20674, NCTC 12414, NRRL B-14765, S. equorum, Staphylococcus sp. SR1, strain PA231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.