STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM58289.1Siderophore biosynthesis protein SbnF; Pfam: IucA / IucC family; Pfam: Ferric iron reductase FhuF-like transporter. (591 aa)    
Predicted Functional Partners:
ALM58287.1
Pfam: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pfam: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; PRINTS: Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature; PRINTS: Ornithine decarboxylase signature; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
 
 0.995
ALM58292.1
Siderophore biosynthesis protein SbnC; Pfam: IucA / IucC family; Pfam: Ferric iron reductase FhuF-like transporter.
 
  
0.991
ALM58294.1
Siderophore biosynthesis protein SbnA; Pfam: Pyridoxal-phosphate dependent enzyme; TIGRFAM: PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA.
 
  
 0.930
ALM58290.1
Siderophore biosynthesis protein SbnE; Pfam: IucA / IucC family; Pfam: Ferric iron reductase FhuF-like transporter.
 
   
0.915
ALM58286.1
Siderophore biosynthesis protein SbnI; Pfam: ParB-like nuclease domain; SMART: ParB-like nuclease domain.
     
 0.914
ALM58291.1
Siderophore biosynthesis protein SbnD; Pfam: Major Facilitator Superfamily; PRINTS: Tetracycline resistance protein signature.
     
 0.907
ALM58293.1
Pfam: Ornithine cyclodeaminase/mu-crystallin family; TIGRFAM: dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB.
 
  
 0.902
ALM58288.1
Siderophore biosynthesis protein SbnG; Pfam: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.893
ALM58295.1
Iron ABC transporter substrate-binding protein; Pfam: Periplasmic binding protein.
 
  
 0.643
ALM56102.1
Pfam: Ornithine cyclodeaminase/mu-crystallin family.
 
  
 0.536
Your Current Organism:
Staphylococcus equorum
NCBI taxonomy Id: 246432
Other names: ATCC 43958, CCUG 30109, CIP 103502, DSM 20674, NCTC 12414, NRRL B-14765, S. equorum, Staphylococcus sp. SR1, strain PA231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.