STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM58315.1Hypothetical protein; TIGRFAM: TIGR02919: accessory Sec system glycosyltransferase GtfB; Pfam: Domain of unknown function (DUF1975). (440 aa)    
Predicted Functional Partners:
ALM58316.1
Glycosyl transferase family 4; Pfam: Domain of unknown function (DUF1975); Pfam: Glycosyl transferases group 1; TIGRFAM: TIGR02918: accessory Sec system glycosylation protein GtfA.
 
 
 
 0.975
ALM56107.1
Glycosyl transferase family 4; Pfam: Domain of unknown function (DUF1975); Pfam: Glycosyl transferases group 1; TIGRFAM: TIGR02918: accessory Sec system glycosylation protein GtfA.
 
 
 
 0.898
ALM58317.1
Hypothetical protein.
       0.634
ALM58398.1
Pfam: Protein of unknown function (DUF1643).
  
     0.514
ALM56103.1
Hypothetical protein; Pfam: YSIRK type signal peptide; TIGRFAM: LPXTG_anchor: LPXTG cell wall anchor domain; Pfam: C-terminus of bacterial fibrinogen-binding adhesin; Pfam: Gram positive anchor; TIGRFAM: YSIRK_signal: gram-positive signal peptide, YSIRK family.
  
 
 0.512
ALM57817.1
Pfam: Glycosyl transferases group 1.
 
 
 
 0.497
ALM57809.1
Membrane protein.
  
     0.490
ALM57569.1
Pfam: Transglycosylase-like domain.
  
    0.488
ALM57487.1
Pfam: Pectate lyase superfamily protein.
  
     0.486
ALM57281.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Staphylococcus equorum
NCBI taxonomy Id: 246432
Other names: ATCC 43958, CCUG 30109, CIP 103502, DSM 20674, NCTC 12414, NRRL B-14765, S. equorum, Staphylococcus sp. SR1, strain PA231
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.