STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM58429.1Hypothetical protein; Pfam: Recombinase; Pfam: Recombinase zinc beta ribbon domain; SMART: Resolvase, N terminal domain; Pfam: Resolvase, N terminal domain. (542 aa)    
Predicted Functional Partners:
ALM58428.1
Cassette chromosome recombinase A1; Pfam: Resolvase, N terminal domain; SMART: Resolvase, N terminal domain; Pfam: Recombinase; Pfam: Recombinase zinc beta ribbon domain.
 
    
0.819
ALM58426.1
Hypothetical protein; Pfam: Domain of unknown function (DUF927).
 
     0.613
ALM58431.1
Pfam: Protein of unknown function (DUF1643).
  
     0.462
ALM58427.1
Hypothetical protein.
       0.424
ALM58398.1
Pfam: Protein of unknown function (DUF1643).
  
     0.411
Your Current Organism:
Staphylococcus equorum
NCBI taxonomy Id: 246432
Other names: ATCC 43958, CCUG 30109, CIP 103502, DSM 20674, NCTC 12414, NRRL B-14765, S. equorum, Staphylococcus sp. SR1, strain PA231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.