STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECM1Extracellular matrix protein 1. (584 aa)    
Predicted Functional Partners:
L9KPZ8_TUPCH
Zinc finger and BTB domain-containing protein 44.
    
 
 0.639
SLC39A13
Zinc transporter ZIP13.
      
 0.637
L9JAU0_TUPCH
Macrophage mannose receptor 1.
     
 0.635
PRL
Prolactin.
      
 0.626
SLC15A1
Solute carrier family 15 member 1.
      
 0.626
ZSWIM8
SWIM-type domain-containing protein.
      
 0.620
MRPS14
28S ribosomal protein S14, mitochondrial.
      
 0.620
GC
Vitamin D-binding protein.
      
 0.610
L8Y836_TUPCH
Ribosome biogenesis protein BMS1 like protein.
      
 0.603
L9L5Y8_TUPCH
Alpha-fetoprotein.
      
 0.588
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.