Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L8Y4M4_TUPCH | L8Y6L2_TUPCH | L8Y4M4 | L8Y6L2 | RNA polymerase-associated protein CTR9 like protein. | RNA polymerase-associated protein LEO1. | 0.999 |
L8Y4M4_TUPCH | L8Y782_TUPCH | L8Y4M4 | L8Y782 | RNA polymerase-associated protein CTR9 like protein. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.957 |
L8Y4M4_TUPCH | L8YCI1_TUPCH | L8Y4M4 | L8YCI1 | RNA polymerase-associated protein CTR9 like protein. | FACT complex subunit SPT16. | 0.992 |
L8Y4M4_TUPCH | L9JCV7_TUPCH | L8Y4M4 | L9JCV7 | RNA polymerase-associated protein CTR9 like protein. | RNA polymerase-associated protein RTF1 like protein. | 0.996 |
L8Y4M4_TUPCH | L9KU10_TUPCH | L8Y4M4 | L9KU10 | RNA polymerase-associated protein CTR9 like protein. | WD repeat-containing protein 61. | 0.953 |
L8Y4M4_TUPCH | L9KYQ4_TUPCH | L8Y4M4 | L9KYQ4 | RNA polymerase-associated protein CTR9 like protein. | Parafibromin. | 0.999 |
L8Y4M4_TUPCH | L9L2B8_TUPCH | L8Y4M4 | L9L2B8 | RNA polymerase-associated protein CTR9 like protein. | FACT complex subunit SSRP1. | 0.947 |
L8Y4M4_TUPCH | PAF1 | L8Y4M4 | L9LEZ6 | RNA polymerase-associated protein CTR9 like protein. | RNA polymerase II-associated factor 1 like protein. | 0.999 |
L8Y4M4_TUPCH | SSRP1 | L8Y4M4 | L9J8M8 | RNA polymerase-associated protein CTR9 like protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.947 |
L8Y4M4_TUPCH | WDR61 | L8Y4M4 | L9L7Q0 | RNA polymerase-associated protein CTR9 like protein. | WD repeat-containing protein 61. | 0.953 |
L8Y6L2_TUPCH | L8Y4M4_TUPCH | L8Y6L2 | L8Y4M4 | RNA polymerase-associated protein LEO1. | RNA polymerase-associated protein CTR9 like protein. | 0.999 |
L8Y6L2_TUPCH | L8Y782_TUPCH | L8Y6L2 | L8Y782 | RNA polymerase-associated protein LEO1. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.995 |
L8Y6L2_TUPCH | L8YCI1_TUPCH | L8Y6L2 | L8YCI1 | RNA polymerase-associated protein LEO1. | FACT complex subunit SPT16. | 0.999 |
L8Y6L2_TUPCH | L9JCV7_TUPCH | L8Y6L2 | L9JCV7 | RNA polymerase-associated protein LEO1. | RNA polymerase-associated protein RTF1 like protein. | 0.998 |
L8Y6L2_TUPCH | L9KU10_TUPCH | L8Y6L2 | L9KU10 | RNA polymerase-associated protein LEO1. | WD repeat-containing protein 61. | 0.996 |
L8Y6L2_TUPCH | L9KYQ4_TUPCH | L8Y6L2 | L9KYQ4 | RNA polymerase-associated protein LEO1. | Parafibromin. | 0.999 |
L8Y6L2_TUPCH | L9L2B8_TUPCH | L8Y6L2 | L9L2B8 | RNA polymerase-associated protein LEO1. | FACT complex subunit SSRP1. | 0.999 |
L8Y6L2_TUPCH | PAF1 | L8Y6L2 | L9LEZ6 | RNA polymerase-associated protein LEO1. | RNA polymerase II-associated factor 1 like protein. | 0.999 |
L8Y6L2_TUPCH | SSRP1 | L8Y6L2 | L9J8M8 | RNA polymerase-associated protein LEO1. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.999 |
L8Y6L2_TUPCH | WDR61 | L8Y6L2 | L9L7Q0 | RNA polymerase-associated protein LEO1. | WD repeat-containing protein 61. | 0.996 |
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