STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L8Y6P3_TUPCHSignal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (86 aa)    
Predicted Functional Partners:
L8Y7P8_TUPCH
Signal recognition particle 72 kDa protein.
    
 0.999
L9KL11_TUPCH
Signal recognition particle 54 kDa protein.
   
 0.999
L9L4G2_TUPCH
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.999
L9LDN0_TUPCH
Signal recognition particle 14 kDa protein.
   
 0.999
L9KMT6_TUPCH
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.986
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.986
L9L1X6_TUPCH
Signal recognition particle 19 kDa protein.
   
 0.981
L9LC83_TUPCH
Signal recognition particle 19 kDa protein.
   
 0.981
L9L229_TUPCH
60S ribosomal protein L13a.
    
   0.820
RPL13
60S ribosomal protein L13.
    
   0.815
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.