STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP30LHistone deacetylase complex subunit SAP30L. (157 aa)    
Predicted Functional Partners:
L9KZK5_TUPCH
AT-rich interactive domain-containing protein 4B.
    
 0.990
L9L1H9_TUPCH
AT-rich interactive domain-containing protein 4A.
    
 0.989
SIN3A
Paired amphipathic helix protein Sin3a.
    
 0.970
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.939
L9KM65_TUPCH
Sin3 histone deacetylase corepressor complex component SDS3.
   
 0.919
RBPJL
Recombining binding protein suppressor of hairless-like protein.
     
 0.918
L8Y051_TUPCH
Breast cancer metastasis-suppressor 1 like protein.
   
 0.891
L9KKA0_TUPCH
Breast cancer metastasis-suppressor 1-like protein.
   
 0.884
CIR1
Corepressor interacting with RBPJ 1.
    
 0.854
NWD1
NACHT and WD repeat domain-containing protein 1.
    
 0.847
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.