STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118AFibulin-1. (1358 aa)    
Predicted Functional Partners:
VCAN
Versican core protein.
   
 0.657
L9K646_TUPCH
Fibulin-2.
  
0.638
ACAN
Aggrecan core protein.
   
 0.635
L9L0Q8_TUPCH
Basement membrane-specific heparan sulfate proteoglycan core protein.
   
 0.602
L9L2J5_TUPCH
Microfibrillar-associated protein 5.
   
 
 0.571
ADAMTS1
A disintegrin and metalloproteinase with thrombospondin motifs 1.
    
 0.556
RASSF8
Ras association domain-containing protein 8.
    
 
 0.553
MFAP4
Microfibril-associated glycoprotein 4.
   
 0.537
L8Y9Z7_TUPCH
Collagen alpha-2(VI) chain.
   
 0.516
VTN
Vitronectin.
    
 0.501
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.