STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD11Protein RRP5 like protein. (202 aa)    
Predicted Functional Partners:
PWP2
Periodic tryptophan protein 2 like protein.
   
 
 0.999
L8Y836_TUPCH
Ribosome biogenesis protein BMS1 like protein.
   
 
 0.999
L9JIN2_TUPCH
Cirhin.
   
 0.999
NOP14
Nucleolar protein 14.
   
 0.999
L9KUL1_TUPCH
WD repeat-containing protein 75.
   
 0.999
L9KVY6_TUPCH
Nucleolar complex protein 4 like protein.
   
 0.999
L9L047_TUPCH
HEAT repeat-containing protein 1.
   
 0.999
L9LCX5_TUPCH
Small subunit processome component 20 like protein.
   
 0.999
BYSL
Bystin.
   
 
 0.998
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 
 0.997
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.