STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP25Matrix metalloproteinase-25. (389 aa)    
Predicted Functional Partners:
MMP24
Matrix metalloproteinase-24.
  
  
 
0.935
GNAI3
Guanine nucleotide-binding protein G(K) subunit alpha.
     
 0.903
CEP295NL
Metalloproteinase inhibitor 2.
   
 0.783
L9KR37_TUPCH
Collagenase 3.
  
0.655
TIMP4
Metalloproteinase inhibitor 4.
   
 0.531
FURIN
Furin; Belongs to the peptidase S8 family.
    
 0.523
L9L687_TUPCH
Matrix metalloproteinase-14.
  
  
0.472
L9KR42_TUPCH
Stromelysin-1.
  
0.416
L9KPS3_TUPCH
Interstitial collagenase.
  
0.412
L9KQE4_TUPCH
Interstitial collagenase.
  
0.410
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.