STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRG1LTumor protein p63-regulated 1-like protein. (258 aa)    
Predicted Functional Partners:
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.849
L8Y905_TUPCH
Serine/arginine-rich splicing factor 2.
   
 0.788
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.788
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.755
SRSF5
Serine/arginine-rich splicing factor 5.
   
 0.747
L9L0E6_TUPCH
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.698
L9KPW0_TUPCH
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.666
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa.
   
 0.650
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.650
L9JLE5_TUPCH
Heterogeneous nuclear ribonucleoprotein M.
   
 0.648
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.