STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBQLN3Ubiquilin-3. (709 aa)    
Predicted Functional Partners:
L9KFK4_TUPCH
Histone H2A deubiquitinase MYSM1.
   
 0.982
UBQLN4
Ubiquilin-4.
    
0.915
UBQLN2
Ubiquilin-2.
    
 
0.910
L9LD85_TUPCH
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.879
L8Y2W4_TUPCH
26S proteasome non-ATPase regulatory subunit 4.
   
 0.837
L9JKG2_TUPCH
UBX domain-containing protein 7.
    
 0.832
TRAF7
E3 ubiquitin-protein ligase TRAF7.
    
 0.825
UBA52
Ubiquitin-60S ribosomal protein L40.
   
 0.800
L9L2P8_TUPCH
Katanin p60 ATPase-containing subunit A-like 2.
   
 0.784
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2.
   
 0.784
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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