STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM249F-box/LRR-repeat protein 6. (610 aa)    
Predicted Functional Partners:
L8YBT0_TUPCH
RING-box protein 2.
    
 0.616
L9L536_TUPCH
Cullin-3; Belongs to the cullin family.
    
 0.604
L9LCR6_TUPCH
Cullin-1; Belongs to the cullin family.
    
 0.604
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.554
L9JP42_TUPCH
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.554
L9KFG1_TUPCH
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.554
L9KJ71_TUPCH
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.554
TCEB1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.526
L8Y162_TUPCH
Cryptochrome-1.
    
 0.470
CRY2
Cryptochrome-2.
    
 0.470
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.