STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9J9A6_TUPCHCyclic nucleotide-gated cation channel beta-3. (89 aa)    
Predicted Functional Partners:
L8Y5M9_TUPCH
Cyclic nucleotide-gated cation channel alpha-3.
 
 
 0.946
CNGA1
cGMP-gated cation channel alpha-1.
 
 
 0.869
L8YBP7_TUPCH
Cyclic nucleotide-gated cation channel alpha-4.
   
 0.800
L8Y066_TUPCH
Cyclic nucleotide-gated olfactory channel.
 
 
 0.798
GNAT2
Guanine nucleotide-binding protein G(T) subunit alpha-2.
   
 0.771
RCVRN
Recoverin.
   
 0.725
L9KZY4_TUPCH
Phosphodiesterase.
   
 0.662
L9KLH5_TUPCH
Proto-oncogene c-Rel.
      
 0.638
SLC24A1
Sodium/potassium/calcium exchanger 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.553
PDE6H
Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
   
  
 0.551
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.