STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASP3Long-chain-fatty-acid--CoA ligase 1. (584 aa)    
Predicted Functional Partners:
CASP7
Caspase-7; Belongs to the peptidase C14A family.
   
0.911
CASP10
CASP8 and FADD-like apoptosis regulator; Belongs to the peptidase C14A family.
   
 0.911
CASP8
Caspase-8; Belongs to the peptidase C14A family.
   
 0.911
CASP9
Caspase-9; Belongs to the peptidase C14A family.
   
 0.911
BIRC7
Baculoviral IAP repeat-containing protein 7.
    
  0.906
BIRC2
Baculoviral IAP repeat-containing protein 2.
    
  0.906
BIRC3
Baculoviral IAP repeat-containing protein 3.
    
  0.906
BIRC5
Baculoviral IAP repeat-containing protein 5.
    
  0.906
PAK2
Non-specific serine/threonine protein kinase.
   
  0.904
PAK1
Non-specific serine/threonine protein kinase.
   
  0.904
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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