STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9JJ12_TUPCHCollagen alpha-2(I) chain. (117 aa)    
Predicted Functional Partners:
COL5A2
Collagen alpha-2(V) chain.
   
0.892
LUM
Lumican.
   
 0.889
SPARC
SPARC.
   
 
 0.798
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.752
L9KLG0_TUPCH
Collagen alpha-3(VI) chain.
   
 
 0.735
L9K1W1_TUPCH
Procollagen C-endopeptidase enhancer 1.
   
 0.720
L8Y9Z7_TUPCH
Collagen alpha-2(VI) chain.
   
 0.717
L8YCU5_TUPCH
Collagen alpha-1(VI) chain.
   
 0.683
L8YEM2_TUPCH
Von Willebrand factor A domain-containing protein 2.
   
 
 0.655
L9KXX7_TUPCH
Collagen alpha-2(VIII) chain.
 
 
 0.647
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.