STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD4Programmed cell death protein 4. (320 aa)    
Predicted Functional Partners:
L9JBE2_TUPCH
Eukaryotic initiation factor 4A-I.
   
 0.803
EIF4A1
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.803
L9KVP1_TUPCH
Eukaryotic initiation factor 4A-I.
   
 0.803
L9LE99_TUPCH
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.803
L8YB92_TUPCH
F-box/WD repeat-containing protein 1A.
    
 
 0.744
L8Y4Y6_TUPCH
Eukaryotic initiation factor 4A-II.
   
 0.704
L9KTM1_TUPCH
Eukaryotic initiation factor 4A-II.
   
 0.704
CLDN18
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.625
L9J8R3_TUPCH
Eukaryotic translation initiation factor 4 gamma 1.
   
 
 0.619
L9JGL6_TUPCH
Thrombospondin-1.
     
 0.583
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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