STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9JT16_TUPCHWD repeat-containing protein 70. (616 aa)    
Predicted Functional Partners:
L9KMN2_TUPCH
Pre-mRNA-splicing factor CWC22 like protein.
   
 0.788
CDC40
Pre-mRNA-processing factor 17.
   
  0.769
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
 
 
 0.769
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.695
SYF2
Pre-mRNA-splicing factor SYF2.
    
  0.687
BUD31
Protein BUD31 like protein.
   
 
 0.680
WDR25
WD repeat-containing protein 25.
   
  0.660
L9JWV6_TUPCH
Pre-mRNA-splicing factor CWC25 like protein.
    
  0.636
DHX8
ATP-dependent RNA helicase DHX8.
 
 
 0.625
L8Y6D4_TUPCH
Peptidylprolyl isomerase domain and WD repeat-containing protein 1.
   
 0.622
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.