STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9K7E4_TUPCHPutative elongation factor 1-alpha-like 3. (286 aa)    
Predicted Functional Partners:
EEF1B2
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.637
VARS
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.605
L8YD29_TUPCH
Elongation factor 1-alpha 1.
 
     0.592
L9K6X0_TUPCH
Elongation factor 1-alpha 1.
 
     0.581
L8Y6C4_TUPCH
Elongation factor 1-alpha 1.
 
     0.575
L9KWU7_TUPCH
Elongation factor 1-alpha 1.
 
     0.575
L9KMT6_TUPCH
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.547
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.547
L8Y4C3_TUPCH
Methionyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.537
L9KKC7_TUPCH
Elongation factor 1-delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.536
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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