STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB25Ras-related protein Rab-25. (213 aa)    
Predicted Functional Partners:
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.877
ITSN1
Intersectin-1.
    
 0.873
RAB11FIP3
Rab11 family-interacting protein 3.
    
 0.806
L8Y5C8_TUPCH
Guanine nucleotide exchange factor for Rab-3A.
    
 0.798
L9KGH0_TUPCH
Rab11 family-interacting protein 4.
    
 0.798
L9L3I1_TUPCH
Rab-3A-interacting protein.
    
 0.798
RAB11FIP2
Rab11 family-interacting protein 2.
  
 0.755
L9JHG3_TUPCH
Rab11 family-interacting protein 2.
  
 0.755
L9KN55_TUPCH
Rab11 family-interacting protein 2.
  
 0.755
L9KPI1_TUPCH
Rab11 family-interacting protein 2; Belongs to the G-protein coupled receptor 1 family.
  
 0.755
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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