STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9KGS2_TUPCHHelicase SKI2W. (1290 aa)    
Predicted Functional Partners:
L8Y1N5_TUPCH
Tetratricopeptide repeat protein 37.
   
 0.999
L9KU10_TUPCH
WD repeat-containing protein 61.
    
 0.955
WDR61
WD repeat-containing protein 61.
    
 0.955
EXOSC7
Exosome complex component RRP42.
   
 0.934
L9JFC4_TUPCH
Exosome complex component CSL4.
   
 0.934
EXOSC9
Exosome complex component RRP45.
   
 0.934
EXOSC3
Exosome complex component RRP40.
   
 0.926
EXOSC5
Exosome complex component RRP46.
   
 0.925
L9KJX4_TUPCH
Exosome complex component MTR3.
   
 0.922
L8YF78_TUPCH
5'-3' exoribonuclease 1.
   
 
 0.917
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.