STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC1LWilliams-Beuren syndrome chromosomal region 16 protein. (381 aa)    
Predicted Functional Partners:
ISG15
Ubiquitin-like protein ISG15.
    
 0.766
APOB
Apolipoprotein B-100.
      
 0.713
L9JE19_TUPCH
Serine/threonine-protein kinase Nek6.
    
 0.618
LRPAP1
Alpha-2-macroglobulin receptor-associated protein.
      
 0.576
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.560
L9K5B7_TUPCH
Serine/threonine-protein kinase Nek7; Belongs to the protein kinase superfamily.
    
 0.540
RBM15B
Putative RNA-binding protein 15B.
      
 0.528
L9L6K2_TUPCH
Whirlin.
    
 
 0.525
L9KJP2_TUPCH
Rab5 GDP/GTP exchange factor.
   
 0.510
L9KGJ5_TUPCH
Putative tRNA pseudouridine synthase 2.
    
 
 0.499
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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