STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF9Krueppel-like factor 9. (360 aa)    
Predicted Functional Partners:
NWD1
NACHT and WD repeat domain-containing protein 1.
    
 
 0.510
SIN3A
Paired amphipathic helix protein Sin3a.
    
 
 0.510
ITM2B
Integral membrane protein 2B.
   
  
 0.467
YPEL
Protein yippee-like; Belongs to the yippee family.
   
  
 0.422
YPEL-2
Protein yippee-like; Belongs to the yippee family.
   
  
 0.422
EMILIN1
EMILIN-1.
    
 0.421
HOXB6
Homeobox protein Hox-B6.
    
 
 0.409
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.