STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9KKP4_TUPCH60S ribosomal protein L6. (250 aa)    
Predicted Functional Partners:
L9KMT6_TUPCH
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.779
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.779
RPL13
60S ribosomal protein L13.
   
 0.598
RPL28
60S ribosomal protein L28.
   
 0.596
RPL38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.564
L9L229_TUPCH
60S ribosomal protein L13a.
  
 0.542
RPS29
40S ribosomal protein S29.
  
 0.533
UBA52
Ubiquitin-60S ribosomal protein L40.
   
 0.532
L8YEF1_TUPCH
60S ribosomal protein L39.
   
 0.529
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.519
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.