STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9KVM2_TUPCHCCR4-NOT transcription complex subunit 7. (196 aa)    
Predicted Functional Partners:
L9KTG3_TUPCH
CCR4-NOT transcription complex subunit 1.
   
 0.962
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 0.955
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 0.951
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.949
CNOT7
CCR4-NOT transcription complex subunit 7.
 
  
  0.946
L9KWK1_TUPCH
CCR4-NOT transcription complex subunit 6.
    
 0.929
CNOT6L
CCR4-NOT transcription complex subunit 6-like protein.
    
 0.925
L9JC65_TUPCH
CCR4-NOT transcription complex subunit 10.
    
 0.893
L9KPW4_TUPCH
Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
   
 0.872
L9KWT7_TUPCH
mRNA-decapping enzyme 2.
    
 
 0.869
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.