Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APOLD1 | BICC1 | L8Y857 | L9KXI9 | Apolipoprotein L domain-containing protein 1. | Protein bicaudal C like protein 1. | 0.530 |
APOLD1 | SDK2 | L8Y857 | L9KZG5 | Apolipoprotein L domain-containing protein 1. | Protein sidekick-2. | 0.448 |
APOLD1 | SLC35F1 | L8Y857 | L9JI63 | Apolipoprotein L domain-containing protein 1. | Solute carrier family 35 member F1. | 0.522 |
BICC1 | APOLD1 | L9KXI9 | L8Y857 | Protein bicaudal C like protein 1. | Apolipoprotein L domain-containing protein 1. | 0.530 |
BICC1 | L9JA53_TUPCH | L9KXI9 | L9JA53 | Protein bicaudal C like protein 1. | Collagen alpha-2(IV) chain. | 0.424 |
BICC1 | L9K6A3_TUPCH | L9KXI9 | L9K6A3 | Protein bicaudal C like protein 1. | Rab effector MyRIP. | 0.438 |
BICC1 | L9KGS7_TUPCH | L9KXI9 | L9KGS7 | Protein bicaudal C like protein 1. | Integrin beta; Belongs to the integrin beta chain family. | 0.452 |
BICC1 | MYRIP | L9KXI9 | L9KA91 | Protein bicaudal C like protein 1. | Rab effector MyRIP. | 0.438 |
BICC1 | RABEP2 | L9KXI9 | L9KTZ9 | Protein bicaudal C like protein 1. | Rab GTPase-binding effector protein 2. | 0.444 |
BICC1 | SDK2 | L9KXI9 | L9KZG5 | Protein bicaudal C like protein 1. | Protein sidekick-2. | 0.584 |
BICC1 | SLC35F1 | L9KXI9 | L9JI63 | Protein bicaudal C like protein 1. | Solute carrier family 35 member F1. | 0.630 |
BICC1 | SSX2IP | L9KXI9 | L9KRQ1 | Protein bicaudal C like protein 1. | Afadin-and alpha-actinin-binding protein. | 0.532 |
BICC1 | ZNF516 | L9KXI9 | L8Y9S1 | Protein bicaudal C like protein 1. | Zinc finger protein 516. | 0.583 |
L9JA53_TUPCH | BICC1 | L9JA53 | L9KXI9 | Collagen alpha-2(IV) chain. | Protein bicaudal C like protein 1. | 0.424 |
L9JA53_TUPCH | SDK2 | L9JA53 | L9KZG5 | Collagen alpha-2(IV) chain. | Protein sidekick-2. | 0.420 |
L9JA53_TUPCH | SLC35F1 | L9JA53 | L9JI63 | Collagen alpha-2(IV) chain. | Solute carrier family 35 member F1. | 0.459 |
L9JA53_TUPCH | ZNF516 | L9JA53 | L8Y9S1 | Collagen alpha-2(IV) chain. | Zinc finger protein 516. | 0.458 |
L9K6A3_TUPCH | BICC1 | L9K6A3 | L9KXI9 | Rab effector MyRIP. | Protein bicaudal C like protein 1. | 0.438 |
L9K6A3_TUPCH | MYRIP | L9K6A3 | L9KA91 | Rab effector MyRIP. | Rab effector MyRIP. | 0.899 |
L9KGS7_TUPCH | BICC1 | L9KGS7 | L9KXI9 | Integrin beta; Belongs to the integrin beta chain family. | Protein bicaudal C like protein 1. | 0.452 |
page 1 of 3