STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9KXX8_TUPCHRab-like protein 3. (217 aa)    
Predicted Functional Partners:
L9L2K1_TUPCH
Geranylgeranyl transferase type-2 subunit alpha.
    
 
 0.594
L9L3I1_TUPCH
Rab-3A-interacting protein.
      
 0.583
L9KJP2_TUPCH
Rab5 GDP/GTP exchange factor.
   
 0.572
L9JBN8_TUPCH
Ras-related protein Rab-24.
   
  
 0.568
L8Y723_TUPCH
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
  
 0.538
HSPA5
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
  
 0.537
HSPA4
Heat shock 70 kDa protein 4.
  
 0.536
L9JCP6_TUPCH
Heat shock protein 105 kDa.
  
 0.536
HSPA4L
Heat shock 70 kDa protein 4L.
  
 0.536
L8Y1T2_TUPCH
Rab3 GTPase-activating protein catalytic subunit.
      
 0.535
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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