STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9KYD4_TUPCHDNA-directed RNA polymerase II subunit RPB3. (77 aa)    
Predicted Functional Partners:
L8Y4L2_TUPCH
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
  
 0.999
POLR2I
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.999
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
 0.999
POLR2L
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
  
 0.999
L8Y9R4_TUPCH
DNA-directed RNA polymerase II subunit RPB2.
  
 0.999
POLR2J
DNA-directed RNA polymerase II subunit RPB11-a.
   
 0.999
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.999
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.999
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.999
POLR1D
DNA-directed RNA polymerases I and III subunit RPAC2.
  
 0.998
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.