STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9L2Y6_TUPCHSyntaxin-7. (295 aa)    
Predicted Functional Partners:
YKT6
Synaptobrevin like protein YKT6; Belongs to the synaptobrevin family.
   
 0.992
L9KH92_TUPCH
Vesicle transport through interaction with t-SNAREs like protein 1A.
   
 0.986
SEC22B
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.973
SEC22C
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
    
 0.930
L8Y995_TUPCH
Beta-soluble NSF attachment protein.
    
 0.929
L9L7S0_TUPCH
Alpha-soluble NSF attachment protein.
    
 0.929
VPS11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
   
 
 0.927
BET1
BET1 like protein.
   
 0.916
L9JCU4_TUPCH
Phospholipase A2.
   
 
 0.915
L9LAV3_TUPCH
Syntaxin-6; Belongs to the syntaxin family.
    
 0.912
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.