Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APP | KLK14 | L9JEB8 | L9L325 | Amyloid beta A4 protein. | Kallikrein-14; Belongs to the peptidase S1 family. | 0.619 |
APP | L9KJT7_TUPCH | L9JEB8 | L9KJT7 | Amyloid beta A4 protein. | Chymotrypsinogen B2. | 0.537 |
APP | L9KPE0_TUPCH | L9JEB8 | L9KPE0 | Amyloid beta A4 protein. | Chymotrypsinogen B; Belongs to the peptidase S1 family. | 0.537 |
APP | PLG | L9JEB8 | L9KQ09 | Amyloid beta A4 protein. | Plasminogen; Belongs to the peptidase S1 family. | 0.457 |
KLK14 | APP | L9L325 | L9JEB8 | Kallikrein-14; Belongs to the peptidase S1 family. | Amyloid beta A4 protein. | 0.619 |
KLK14 | L8YEV7_TUPCH | L9L325 | L8YEV7 | Kallikrein-14; Belongs to the peptidase S1 family. | Hepatocyte growth factor receptor. | 0.554 |
KLK14 | L9KFJ2_TUPCH | L9L325 | L9KFJ2 | Kallikrein-14; Belongs to the peptidase S1 family. | Pancreatic trypsin inhibitor. | 0.505 |
KLK14 | L9KJT7_TUPCH | L9L325 | L9KJT7 | Kallikrein-14; Belongs to the peptidase S1 family. | Chymotrypsinogen B2. | 0.697 |
KLK14 | L9KPE0_TUPCH | L9L325 | L9KPE0 | Kallikrein-14; Belongs to the peptidase S1 family. | Chymotrypsinogen B; Belongs to the peptidase S1 family. | 0.557 |
KLK14 | L9L310_TUPCH | L9L325 | L9L310 | Kallikrein-14; Belongs to the peptidase S1 family. | Tryptase beta-2. | 0.572 |
KLK14 | MST1R | L9L325 | L8Y001 | Kallikrein-14; Belongs to the peptidase S1 family. | Macrophage-stimulating protein receptor. | 0.554 |
KLK14 | PLG | L9L325 | L9KQ09 | Kallikrein-14; Belongs to the peptidase S1 family. | Plasminogen; Belongs to the peptidase S1 family. | 0.467 |
KLK14 | SPINK5 | L9L325 | L9KZ66 | Kallikrein-14; Belongs to the peptidase S1 family. | Serine protease inhibitor Kazal-type 5. | 0.556 |
KLK14 | TFPI | L9L325 | L9KVW5 | Kallikrein-14; Belongs to the peptidase S1 family. | Tissue factor pathway inhibitor. | 0.548 |
L8YEV7_TUPCH | KLK14 | L8YEV7 | L9L325 | Hepatocyte growth factor receptor. | Kallikrein-14; Belongs to the peptidase S1 family. | 0.554 |
L8YEV7_TUPCH | L9KJT7_TUPCH | L8YEV7 | L9KJT7 | Hepatocyte growth factor receptor. | Chymotrypsinogen B2. | 0.554 |
L8YEV7_TUPCH | L9KPE0_TUPCH | L8YEV7 | L9KPE0 | Hepatocyte growth factor receptor. | Chymotrypsinogen B; Belongs to the peptidase S1 family. | 0.554 |
L8YEV7_TUPCH | L9L310_TUPCH | L8YEV7 | L9L310 | Hepatocyte growth factor receptor. | Tryptase beta-2. | 0.554 |
L8YEV7_TUPCH | MST1R | L8YEV7 | L8Y001 | Hepatocyte growth factor receptor. | Macrophage-stimulating protein receptor. | 0.685 |
L8YEV7_TUPCH | PLG | L8YEV7 | L9KQ09 | Hepatocyte growth factor receptor. | Plasminogen; Belongs to the peptidase S1 family. | 0.588 |
page 1 of 4