STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX8LIM/homeobox protein Lhx8. (348 aa)    
Predicted Functional Partners:
FIGLA
Factor in the germline alpha.
   
 0.697
LDB1
LIM domain-binding protein 1.
    
 0.630
LDB2
LIM domain-binding protein 2.
    
 0.611
L8YFF8_TUPCH
Spermatogenesis-and oogenesis-specific basic helix-loop-helix-containing protein 1.
      
 0.593
L9LD47_TUPCH
Homeobox protein NOBOX.
      
 0.561
GBX1
Homeobox protein GBX-1.
    
 
 0.548
L9L9A6_TUPCH
Homeobox protein DLX-2.
   
  
 0.482
MSX1
Homeobox protein MSX-1.
    
 
 0.478
L9KLI1_TUPCH
Y-box-binding protein 2.
      
 0.454
GATA3
Trans-acting T-cell-specific transcription factor GATA-3.
   
 0.440
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.