Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L8Y7I4_TUPCH | L9KH03_TUPCH | L8Y7I4 | L9KH03 | WD repeat-containing protein 3. | U3 small nucleolar RNA-associated protein 6 like protein. | 0.999 |
L8Y7I4_TUPCH | L9KVY6_TUPCH | L8Y7I4 | L9KVY6 | WD repeat-containing protein 3. | Nucleolar complex protein 4 like protein. | 0.997 |
L8Y7I4_TUPCH | L9L0E6_TUPCH | L8Y7I4 | L9L0E6 | WD repeat-containing protein 3. | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | 0.477 |
L8Y7I4_TUPCH | L9L2H8_TUPCH | L8Y7I4 | L9L2H8 | WD repeat-containing protein 3. | Neuroguidin. | 0.977 |
L8Y7I4_TUPCH | MPHOSPH10 | L8Y7I4 | L8Y490 | WD repeat-containing protein 3. | U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. | 0.997 |
L8Y7I4_TUPCH | NAT10 | L8Y7I4 | L8YBH3 | WD repeat-containing protein 3. | RNA cytidine acetyltransferase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. | 0.992 |
L8Y7I4_TUPCH | NOM1 | L8Y7I4 | L9L4X4 | WD repeat-containing protein 3. | Nucleolar MIF4G domain-containing protein 1. | 0.984 |
L8Y7I4_TUPCH | RRP36 | L8Y7I4 | L9KU94 | WD repeat-containing protein 3. | Ribosomal RNA processing protein 36 like protein. | 0.642 |
L8Y7I4_TUPCH | RRP9 | L8Y7I4 | L8Y5R4 | WD repeat-containing protein 3. | U3 small nucleolar RNA-interacting protein 2. | 0.990 |
L8Y7I4_TUPCH | UTP3 | L8Y7I4 | L9L9Q9 | WD repeat-containing protein 3. | Something about silencing protein 10. | 0.991 |
L9KH03_TUPCH | L8Y7I4_TUPCH | L9KH03 | L8Y7I4 | U3 small nucleolar RNA-associated protein 6 like protein. | WD repeat-containing protein 3. | 0.999 |
L9KH03_TUPCH | L9KVY6_TUPCH | L9KH03 | L9KVY6 | U3 small nucleolar RNA-associated protein 6 like protein. | Nucleolar complex protein 4 like protein. | 0.993 |
L9KH03_TUPCH | L9L0E6_TUPCH | L9KH03 | L9L0E6 | U3 small nucleolar RNA-associated protein 6 like protein. | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | 0.661 |
L9KH03_TUPCH | L9L2H8_TUPCH | L9KH03 | L9L2H8 | U3 small nucleolar RNA-associated protein 6 like protein. | Neuroguidin. | 0.998 |
L9KH03_TUPCH | MPHOSPH10 | L9KH03 | L8Y490 | U3 small nucleolar RNA-associated protein 6 like protein. | U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. | 0.997 |
L9KH03_TUPCH | NAT10 | L9KH03 | L8YBH3 | U3 small nucleolar RNA-associated protein 6 like protein. | RNA cytidine acetyltransferase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. | 0.995 |
L9KH03_TUPCH | NOM1 | L9KH03 | L9L4X4 | U3 small nucleolar RNA-associated protein 6 like protein. | Nucleolar MIF4G domain-containing protein 1. | 0.972 |
L9KH03_TUPCH | RRP36 | L9KH03 | L9KU94 | U3 small nucleolar RNA-associated protein 6 like protein. | Ribosomal RNA processing protein 36 like protein. | 0.986 |
L9KH03_TUPCH | RRP9 | L9KH03 | L8Y5R4 | U3 small nucleolar RNA-associated protein 6 like protein. | U3 small nucleolar RNA-interacting protein 2. | 0.998 |
L9KH03_TUPCH | UTP3 | L9KH03 | L9L9Q9 | U3 small nucleolar RNA-associated protein 6 like protein. | Something about silencing protein 10. | 0.998 |
page 1 of 6