STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOM1Nucleolar MIF4G domain-containing protein 1. (873 aa)    
Predicted Functional Partners:
L9L0E6_TUPCH
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 
 0.989
L8Y7I4_TUPCH
WD repeat-containing protein 3.
   
 
 0.984
L9L2H8_TUPCH
Neuroguidin.
   
   0.984
UTP3
Something about silencing protein 10.
   
 
 0.980
NAT10
RNA cytidine acetyltransferase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
   
 
 0.979
RRP36
Ribosomal RNA processing protein 36 like protein.
   
 
 0.977
L9KVY6_TUPCH
Nucleolar complex protein 4 like protein.
   
   0.976
RRP9
U3 small nucleolar RNA-interacting protein 2.
   
 
 0.974
L9KH03_TUPCH
U3 small nucleolar RNA-associated protein 6 like protein.
   
   0.972
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
   0.966
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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