STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLHE40Class E basic helix-loop-helix protein 40. (412 aa)    
Predicted Functional Partners:
L9KLE5_TUPCH
Period circadian protein like protein 2.
   
 0.683
L9LAL3_TUPCH
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.680
L9L152_TUPCH
Period circadian protein like protein 3.
   
 0.658
L8Y162_TUPCH
Cryptochrome-1.
   
 
 0.630
NFIL3
Nuclear factor interleukin-3-regulated protein.
    
 0.620
L8Y4I1_TUPCH
Nuclear receptor subfamily 1 group D member 2.
   
 
 0.608
NR1D1
Nuclear receptor subfamily 1 group D member 1.
    
 
 0.577
L9JG26_TUPCH
Proteasome subunit beta type-2.
    
 
 0.576
L9K7L2_TUPCH
Nuclear receptor ROR-beta.
    
 
 0.513
CRY2
Cryptochrome-2.
   
 
 0.505
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.