STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9L637_TUPCHCullin-4B; Belongs to the cullin family. (386 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1.
   
 0.999
L8Y933_TUPCH
Denticleless protein like protein.
    
 0.993
L9L0Y6_TUPCH
Cullin-associated NEDD8-dissociated protein 1.
   
 0.975
L8YBT0_TUPCH
RING-box protein 2.
    
 0.953
DDB2
DNA damage-binding protein 2.
    
 0.948
L9KTK0_TUPCH
DNA excision repair protein ERCC-8.
    
 0.940
FITM1
DDB1-and CUL4-associated factor 11.
    
 0.931
L8Y5S5_TUPCH
Protein VPRBP.
   
 
 0.930
COPS4
COP9 signalosome complex subunit 4.
    
 0.923
L9LCF5_TUPCH
COP9 signalosome complex subunit 2.
   
 0.915
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.