STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9L6F5_TUPCHSyntaxin-binding protein 6. (78 aa)    
Predicted Functional Partners:
GABRD
Protein kinase C zeta type; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 
 0.700
STX4
Syntaxin-4; Belongs to the syntaxin family.
    
 
 0.624
CBLN3
Cerebellin-3.
      
 0.568
HIVEP3
Transcription factor HIVEP3.
    
 
 0.537
L9JVX3_TUPCH
Protein MMS22-like protein.
      
 0.530
NYNRIN
Protein NYNRIN.
      
 0.530
L9L7S0_TUPCH
Alpha-soluble NSF attachment protein.
    
 
 0.528
L8YA34_TUPCH
Partitioning defective 6 like protein gamma.
    
 
 0.521
PARD6A
Partitioning defective 6 like protein alpha.
    
 
 0.521
PARD6B
Partitioning defective 6 like protein beta.
    
 
 0.521
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.