STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L9L7C9_TUPCHEndoplasmic reticulum-Golgi intermediate compartment protein 3. (393 aa)    
Predicted Functional Partners:
L9LCW8_TUPCH
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
   
 
0.994
GTPBP3
tRNA modification GTPase GTPBP3, mitochondrial.
  
 0.951
L8Y3B7_TUPCH
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.899
GTSE1
Mitochondrial tRNA-specific 2-thiouridylase 1.
  
 0.809
YARS
Tyrosine--tRNA ligase.
  
  
 0.655
L9LCA9_TUPCH
Bifunctional aminoacyl-tRNA synthetase.
  
  
 0.599
OXA1L
Mitochondrial inner membrane protein OXA1L.
  
  
 0.588
L8YGF7_TUPCH
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
   
  
 0.559
LMAN2
Vesicular integral-membrane protein VIP36.
   
 
 0.528
L8YCE7_TUPCH
Biogenesis of lysosome-related organelles complex 1 subunit 1.
   
  
 0.509
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.