STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHTN1Shootin-1. (121 aa)    
Predicted Functional Partners:
L8YAX7_TUPCH
Neural cell adhesion molecule L1.
    
 0.770
L9L814_TUPCH
Heat shock 70 kDa protein 12A.
   
 
 0.596
EDEM3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.565
L8YGR2_TUPCH
Neuronal cell adhesion molecule.
    
 0.554
L9L2E3_TUPCH
Neural cell adhesion molecule L1-like protein.
    
 0.554
L9L123_TUPCH
Lysophospholipid acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
    
 
 0.534
L9JIR0_TUPCH
Kinesin heavy chain isoform 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.488
NFASC
Neurofascin.
    
 0.464
PNLIP
Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.
    
 0.443
L9JDL2_TUPCH
Periphilin-1.
   
 
 0.429
Your Current Organism:
Tupaia chinensis
NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis
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