STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KEZ53335.1Gas vesicle protein GvpP; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
KEZ53334.1
Gas vesicle protein GvpQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
gvpA
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
       0.721
KEZ53332.1
Gas vesicle protein GvpR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
KEZ53329.1
Gas vesicle protein GvpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.632
KEZ53330.1
Gas vesicle protein GvpF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.632
KEZ53328.1
Gas vesicle protein GvpL; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
gvpA-2
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
       0.618
KEZ53326.1
Gas vesicle protein GvpK; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.573
KEZ53327.1
Gas vesicle protein GvpS; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
       0.573
KEZ53331.1
Gas vesicle protein GvpN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.501
Your Current Organism:
Bacillus indicus
NCBI taxonomy Id: 246786
Other names: B. indicus, Bacillus cibi, Bacillus cibi Yoon et al. 2005, Bacillus indicus Suresh et al. 2004 emend. Stropko et al. 2014, Bacillus sp. KU12, Bacillus sp. KU14, DSM 15820, DSM 16189 [[Bacillus cibi]], JCM 12168, KCTC 3880 [[Bacillus cibi]], LMG 22858, LMG:22858, MTCC 4374, strain JG-30 [[Bacillus cibi]], strain Sd/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.