KEZ48269.1 protein (Bacillus indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KEZ48269.1

Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)

Predicted Functional Partners:

KEZ48268.1

0.976

KEZ48270.1

0.972

KEZ53624.1

0.904

KEZ48271.1

0.903

KEZ47258.1

0.903

KEZ54457.1

0.867

KEZ53394.1

0.866

KEZ53573.1

0.857

KEZ47205.1

0.849

KEZ53529.1

0.845

Your Current Organism:

Bacillus indicus

NCBI taxonomy Id: 246786
Other names: B. indicus, Bacillus cibi, Bacillus cibi Yoon et al. 2005, Bacillus indicus Suresh et al. 2004 emend. Stropko et al. 2014, Bacillus sp. KU12, Bacillus sp. KU14, DSM 15820, DSM 16189 [[Bacillus cibi]], JCM 12168, KCTC 3880 [[Bacillus cibi]], LMG 22858, LMG:22858, MTCC 4374, strain JG-30 [[Bacillus cibi]], strain Sd/3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KEZ47205.1	KEZ48268.1	GS18_0220385	GS18_0217185	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
KEZ47205.1	KEZ48269.1	GS18_0220385	GS18_0217190	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.849
KEZ47205.1	KEZ48271.1	GS18_0220385	GS18_0217200	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
KEZ47258.1	KEZ48268.1	GS18_0220675	GS18_0217185	Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
KEZ47258.1	KEZ48269.1	GS18_0220675	GS18_0217190	Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KEZ47258.1	KEZ48271.1	GS18_0220675	GS18_0217200	Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
KEZ48268.1	KEZ47205.1	GS18_0217185	GS18_0220385	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
KEZ48268.1	KEZ47258.1	GS18_0217185	GS18_0220675	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
KEZ48268.1	KEZ48269.1	GS18_0217185	GS18_0217190	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KEZ48268.1	KEZ48270.1	GS18_0217185	GS18_0217195	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
KEZ48268.1	KEZ48271.1	GS18_0217185	GS18_0217200	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
KEZ48268.1	KEZ53394.1	GS18_0217185	GS18_0207300	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
KEZ48268.1	KEZ53529.1	GS18_0217185	GS18_0200610	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
KEZ48268.1	KEZ53573.1	GS18_0217185	GS18_0200850	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
KEZ48268.1	KEZ53624.1	GS18_0217185	GS18_0201165	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
KEZ48268.1	KEZ54457.1	GS18_0217185	GS18_0205980	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
KEZ48269.1	KEZ47205.1	GS18_0217190	GS18_0220385	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.849
KEZ48269.1	KEZ47258.1	GS18_0217190	GS18_0220675	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KEZ48269.1	KEZ48268.1	GS18_0217190	GS18_0217185	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KEZ48269.1	KEZ48270.1	GS18_0217190	GS18_0217195	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2023

Credits

Access

Info

About