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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KEZ47442.1Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)    
Predicted Functional Partners:
KEZ47440.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
crtNc
Capsular biosynthesis protein CpsH; Involved in the biosynthesis of the major C30 carotenoid methyl 4'-[6-O-(acylglycosyl)oxy]-4,4'-diapolycopen-4-oic acid via 4,4'-diapolycopen-4-oic acid intermediate. Catalyzes the oxidation of 4,4'-diapolycopen-4-al to yield 4,4'-diapolycopen-4-oic acid.
 
 0.993
KEZ47506.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
KEZ47446.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
KEZ53928.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
KEZ47559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
nuoH
NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.926
KEZ49103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.905
KEZ51695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.891
nuoD
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.885
Your Current Organism:
Bacillus indicus
NCBI taxonomy Id: 246786
Other names: B. indicus, Bacillus cibi, Bacillus cibi Yoon et al. 2005, Bacillus indicus Suresh et al. 2004 emend. Stropko et al. 2014, Bacillus sp. KU12, Bacillus sp. KU14, DSM 15820, DSM 16189 [[Bacillus cibi]], JCM 12168, KCTC 3880 [[Bacillus cibi]], LMG 22858, LMG:22858, MTCC 4374, strain JG-30 [[Bacillus cibi]], strain Sd/3
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