Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ57787.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
ALJ59389.1
Hypothetical protein.
  
     0.759
ALJ61074.1
Hypothetical protein.
  
     0.758
ALJ61825.1
Anaphase-promoting complex, cyclosome, subunit 3.
  
     0.755
ALJ60157.1
Hypothetical protein.
  
     0.752
ALJ61385.1
Hypothetical protein.
  
     0.745
ALJ58947.1
Hypothetical protein.
  
     0.739
ALJ61696.1
Hypothetical protein.
  
     0.736
ALJ58755.1
Hypothetical protein.
  
     0.726
ALJ61463.1
Hypothetical protein.
  
     0.725
ALJ60181.1
Hypothetical protein.
  
     0.716
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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