Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mntHDivalent metal cation transporter MntH. (420 aa)    
Predicted Functional Partners:
ada
Bifunctional transcriptional activator/DNA repair enzyme Ada.
       0.827
exoA
Exodeoxyribonuclease.
     
 0.809
ALJ57788.1
Putative redox-active protein (C_GCAxxG_C_C).
     
 0.781
ALJ57793.1
Putative transcriptional regulatory protein.
       0.643
ALJ57787.1
Hypothetical protein.
 
     0.639
ALJ57792.1
TSCPD domain protein.
       0.625
pheT
Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.522
znuB
High-affinity zinc uptake system membrane protein ZnuB.
  
  
 0.459
czcD
Cadmium, cobalt and zinc/H(+)-K(+) antiporter.
  
 
 0.409
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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