Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALJ57816.1LPS O-antigen length regulator. (376 aa)    
Predicted Functional Partners:
kpsD_1
Polysialic acid transport protein KpsD precursor.
 
  
 0.952
kpsD_2
Polysialic acid transport protein KpsD precursor.
 
  
 0.802
upxZ_9
Hypothetical protein.
       0.641
ALJ57819.1
Transcriptional activator RfaH.
  
    0.602
tuaB_1
Teichuronic acid biosynthesis protein TuaB.
  
  
 0.528
ALJ62733.1
Tetratricopeptide repeat protein.
  
     0.462
ALJ61807.1
Hypothetical protein; DUF based on B. Theta Gene description.
  
     0.457
ALJ61233.1
Recombination protein F.
  
     0.446
mfpsA_1
Mannosylfructose-phosphate synthase.
 
  
 0.439
vioA_1
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase.
  
  
 0.426
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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