Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ58020.1 | ALJ58021.1 | BcellWH2_00757 | BcellWH2_00758 | Site-specific tyrosine recombinase XerC. | Hypothetical protein. | 0.526 |
ALJ58020.1 | dinB_1 | BcellWH2_00757 | BcellWH2_00760 | Site-specific tyrosine recombinase XerC. | DNA polymerase IV. | 0.562 |
ALJ58020.1 | lexA | BcellWH2_00757 | BcellWH2_00759 | Site-specific tyrosine recombinase XerC. | LexA repressor; Belongs to the peptidase S24 family. | 0.579 |
ALJ58020.1 | yedK | BcellWH2_00757 | BcellWH2_00761 | Site-specific tyrosine recombinase XerC. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.634 |
ALJ58021.1 | ALJ58020.1 | BcellWH2_00758 | BcellWH2_00757 | Hypothetical protein. | Site-specific tyrosine recombinase XerC. | 0.526 |
ALJ58021.1 | dinB_1 | BcellWH2_00758 | BcellWH2_00760 | Hypothetical protein. | DNA polymerase IV. | 0.773 |
ALJ58021.1 | lexA | BcellWH2_00758 | BcellWH2_00759 | Hypothetical protein. | LexA repressor; Belongs to the peptidase S24 family. | 0.773 |
ALJ58021.1 | yedK | BcellWH2_00758 | BcellWH2_00761 | Hypothetical protein. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.773 |
dinB_1 | ALJ58020.1 | BcellWH2_00760 | BcellWH2_00757 | DNA polymerase IV. | Site-specific tyrosine recombinase XerC. | 0.562 |
dinB_1 | ALJ58021.1 | BcellWH2_00760 | BcellWH2_00758 | DNA polymerase IV. | Hypothetical protein. | 0.773 |
dinB_1 | lexA | BcellWH2_00760 | BcellWH2_00759 | DNA polymerase IV. | LexA repressor; Belongs to the peptidase S24 family. | 0.982 |
dinB_1 | yedK | BcellWH2_00760 | BcellWH2_00761 | DNA polymerase IV. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.836 |
lexA | ALJ58020.1 | BcellWH2_00759 | BcellWH2_00757 | LexA repressor; Belongs to the peptidase S24 family. | Site-specific tyrosine recombinase XerC. | 0.579 |
lexA | ALJ58021.1 | BcellWH2_00759 | BcellWH2_00758 | LexA repressor; Belongs to the peptidase S24 family. | Hypothetical protein. | 0.773 |
lexA | dinB_1 | BcellWH2_00759 | BcellWH2_00760 | LexA repressor; Belongs to the peptidase S24 family. | DNA polymerase IV. | 0.982 |
lexA | yedK | BcellWH2_00759 | BcellWH2_00761 | LexA repressor; Belongs to the peptidase S24 family. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.806 |
yedK | ALJ58020.1 | BcellWH2_00761 | BcellWH2_00757 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | Site-specific tyrosine recombinase XerC. | 0.634 |
yedK | ALJ58021.1 | BcellWH2_00761 | BcellWH2_00758 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | Hypothetical protein. | 0.773 |
yedK | dinB_1 | BcellWH2_00761 | BcellWH2_00760 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | DNA polymerase IV. | 0.836 |
yedK | lexA | BcellWH2_00761 | BcellWH2_00759 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | LexA repressor; Belongs to the peptidase S24 family. | 0.806 |