Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ58237.1 | ALJ58239.1 | BcellWH2_00975 | BcellWH2_00977 | PGL/p-HBAD biosynthesis glycosyltransferase. | Putative glycosyl transferase. | 0.794 |
ALJ58237.1 | ALJ58241.1 | BcellWH2_00975 | BcellWH2_00979 | PGL/p-HBAD biosynthesis glycosyltransferase. | Hypothetical protein. | 0.437 |
ALJ58237.1 | epsJ_2 | BcellWH2_00975 | BcellWH2_00980 | PGL/p-HBAD biosynthesis glycosyltransferase. | Putative glycosyltransferase EpsJ. | 0.856 |
ALJ58237.1 | gmd_2 | BcellWH2_00975 | BcellWH2_00974 | PGL/p-HBAD biosynthesis glycosyltransferase. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.826 |
ALJ58237.1 | rmd_1 | BcellWH2_00975 | BcellWH2_00973 | PGL/p-HBAD biosynthesis glycosyltransferase. | GDP-6-deoxy-D-mannose reductase. | 0.776 |
ALJ58237.1 | vatD_2 | BcellWH2_00975 | BcellWH2_00976 | PGL/p-HBAD biosynthesis glycosyltransferase. | Streptogramin A acetyltransferase. | 0.798 |
ALJ58237.1 | wbpA_4 | BcellWH2_00975 | BcellWH2_00978 | PGL/p-HBAD biosynthesis glycosyltransferase. | UDP-N-acetyl-D-glucosamine 6-dehydrogenase. | 0.593 |
ALJ58239.1 | ALJ58237.1 | BcellWH2_00977 | BcellWH2_00975 | Putative glycosyl transferase. | PGL/p-HBAD biosynthesis glycosyltransferase. | 0.794 |
ALJ58239.1 | ALJ58241.1 | BcellWH2_00977 | BcellWH2_00979 | Putative glycosyl transferase. | Hypothetical protein. | 0.437 |
ALJ58239.1 | epsJ_2 | BcellWH2_00977 | BcellWH2_00980 | Putative glycosyl transferase. | Putative glycosyltransferase EpsJ. | 0.489 |
ALJ58239.1 | gmd_2 | BcellWH2_00977 | BcellWH2_00974 | Putative glycosyl transferase. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.799 |
ALJ58239.1 | rmd_1 | BcellWH2_00977 | BcellWH2_00973 | Putative glycosyl transferase. | GDP-6-deoxy-D-mannose reductase. | 0.778 |
ALJ58239.1 | vatD_2 | BcellWH2_00977 | BcellWH2_00976 | Putative glycosyl transferase. | Streptogramin A acetyltransferase. | 0.793 |
ALJ58239.1 | wbpA_4 | BcellWH2_00977 | BcellWH2_00978 | Putative glycosyl transferase. | UDP-N-acetyl-D-glucosamine 6-dehydrogenase. | 0.610 |
ALJ58241.1 | ALJ58237.1 | BcellWH2_00979 | BcellWH2_00975 | Hypothetical protein. | PGL/p-HBAD biosynthesis glycosyltransferase. | 0.437 |
ALJ58241.1 | ALJ58239.1 | BcellWH2_00979 | BcellWH2_00977 | Hypothetical protein. | Putative glycosyl transferase. | 0.437 |
ALJ58241.1 | epsJ_2 | BcellWH2_00979 | BcellWH2_00980 | Hypothetical protein. | Putative glycosyltransferase EpsJ. | 0.773 |
ALJ58241.1 | gmd_2 | BcellWH2_00979 | BcellWH2_00974 | Hypothetical protein. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.437 |
ALJ58241.1 | rmd_1 | BcellWH2_00979 | BcellWH2_00973 | Hypothetical protein. | GDP-6-deoxy-D-mannose reductase. | 0.422 |
ALJ58241.1 | vatD_2 | BcellWH2_00979 | BcellWH2_00976 | Hypothetical protein. | Streptogramin A acetyltransferase. | 0.437 |
page 1 of 3