STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ58296.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
rpoE_1
ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
   
 
 0.820
ALJ58297.1
Putative metallophosphoesterase.
  
  
 0.808
ALJ58294.1
Hypothetical protein.
       0.475
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
    0.454
ALJ58293.1
Hypothetical protein.
     
 0.444
ALJ59909.1
FHA domain protein.
   
 
 0.437
pyrC
Dihydroorotase.
       0.430
metH_1
Methionine synthase.
       0.430
ALJ62642.1
FHA domain protein.
   
 
 0.410
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.