Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ57986.1 | ALJ58375.1 | BcellWH2_00722 | BcellWH2_01113 | Hypothetical protein. | Antitoxin HipB. | 0.881 |
ALJ58098.1 | ALJ58375.1 | BcellWH2_00835 | BcellWH2_01113 | Hypothetical protein. | Antitoxin HipB. | 0.878 |
ALJ58372.1 | ALJ58375.1 | BcellWH2_01110 | BcellWH2_01113 | Fec operon regulator FecR. | Antitoxin HipB. | 0.548 |
ALJ58372.1 | higB_1 | BcellWH2_01110 | BcellWH2_01112 | Fec operon regulator FecR. | Toxin HigB. | 0.548 |
ALJ58372.1 | sigW_2 | BcellWH2_01110 | BcellWH2_01111 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.886 |
ALJ58375.1 | ALJ57986.1 | BcellWH2_01113 | BcellWH2_00722 | Antitoxin HipB. | Hypothetical protein. | 0.881 |
ALJ58375.1 | ALJ58098.1 | BcellWH2_01113 | BcellWH2_00835 | Antitoxin HipB. | Hypothetical protein. | 0.878 |
ALJ58375.1 | ALJ58372.1 | BcellWH2_01113 | BcellWH2_01110 | Antitoxin HipB. | Fec operon regulator FecR. | 0.548 |
ALJ58375.1 | ALJ58377.1 | BcellWH2_01113 | BcellWH2_01115 | Antitoxin HipB. | Hypothetical protein. | 0.449 |
ALJ58375.1 | ALJ62673.1 | BcellWH2_01113 | BcellWH2_05475 | Antitoxin HipB. | Hypothetical protein. | 0.874 |
ALJ58375.1 | higB_1 | BcellWH2_01113 | BcellWH2_01112 | Antitoxin HipB. | Toxin HigB. | 0.970 |
ALJ58375.1 | oatA | BcellWH2_01113 | BcellWH2_01114 | Antitoxin HipB. | O-acetyltransferase OatA. | 0.469 |
ALJ58375.1 | sigW_2 | BcellWH2_01113 | BcellWH2_01111 | Antitoxin HipB. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.567 |
ALJ58377.1 | ALJ58375.1 | BcellWH2_01115 | BcellWH2_01113 | Hypothetical protein. | Antitoxin HipB. | 0.449 |
ALJ58377.1 | higB_1 | BcellWH2_01115 | BcellWH2_01112 | Hypothetical protein. | Toxin HigB. | 0.449 |
ALJ58377.1 | oatA | BcellWH2_01115 | BcellWH2_01114 | Hypothetical protein. | O-acetyltransferase OatA. | 0.834 |
ALJ62673.1 | ALJ58375.1 | BcellWH2_05475 | BcellWH2_01113 | Hypothetical protein. | Antitoxin HipB. | 0.874 |
higB_1 | ALJ58372.1 | BcellWH2_01112 | BcellWH2_01110 | Toxin HigB. | Fec operon regulator FecR. | 0.548 |
higB_1 | ALJ58375.1 | BcellWH2_01112 | BcellWH2_01113 | Toxin HigB. | Antitoxin HipB. | 0.970 |
higB_1 | ALJ58377.1 | BcellWH2_01112 | BcellWH2_01115 | Toxin HigB. | Hypothetical protein. | 0.449 |
page 1 of 2